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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs117588996 chr8:1733124 G/A 1.58E-6 395 15.33 15.6 5.42 KM Plot
LGG rs117666635 chr20:3360491 G/C 1.04E-7 406 15.93 11.55 6.83 KM Plot
LGG rs117738308 chr15:84411001 G/T 8.33E-15 404 15.2 16.3 6.6 KM Plot
LGG rs11777585 chr8:49714141 A/C 6.66E-16 405 15.67 13.75 5.17 KM Plot
LGG rs11779344 chr8:49715349 T/C 7.77E-16 404 15.63 14.65 5.17 KM Plot
LGG rs11779699 chr8:49682858 G/T 5.55E-16 407 15.7 13.13 5.17 KM Plot
LGG rs117813095 chr20:62506274 C/G 3.53E-13 407 15.25 15.8 5.4 KM Plot
LGG rs117833829 chr9:95450028 A/G 0.000148 407 15.17 17.7 7.12 KM Plot
LGG rs11785222 chr8:49656604 A/G 6.66E-16 404 15.7 14.63 5.17 KM Plot
LGG rs11791002 chr9:33966963 G/A 6.44E-6 405 15.37 16.3 6.13 KM Plot
LGG rs11791277 chr9:34002680 C/A 6.44E-6 404 15.37 16.38 6.13 KM Plot
LGG rs117926250 chr9:95463358 G/A 0.000148 407 15.17 17.7 7.12 KM Plot
LGG rs117967248 chr7:5038581 C/T 0.000199 403 15.25 16.43 12.03 KM Plot
LGG rs118000123 chr8:1733055 C/T 1.58E-6 395 15.33 15.6 5.42 KM Plot
LGG rs11812170 chr10:879697 C/T 3.62E-5 407 15.13 17.73 12.17 KM Plot